dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01312
Location and strand information: 4524 - 5867 (+)
Family: 2.A.38.4.1
Protein type: TC
Protein description: Ktr system potassium uptake protein B

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01313
Location and strand information: 5903 - 6550 (+)
Family: 2.A.38.4.6
Protein type: TC
Protein description: Ktr system potassium uptake protein A

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01314
Location and strand information: 7127 - 7564 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01315
Location and strand information: 7561 - 9288 (+)
Family: 3.A.1.135.7
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01316
Location and strand information: 9281 - 11110 (+)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01317
Location and strand information: 11154 - 11999 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01318
Location and strand information: 12100 - 14349 (+)
Family: GH95|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2357
Protein molecular weight: 84416.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01319
Location and strand information: 14489 - 16273 (+)
Family: null
Protein type: null
Protein description: L-fucose isomerase

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01320
Location and strand information: 16317 - 18455 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001850_22|CGC1
Gene ID: MGYG000001850_01321
Location and strand information: 18452 - 20269 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4986
Protein molecular weight: 68955.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001850_01312	Ktr system potassium uptake protein B	TC	4524	5867	+	2.A.38.4.1
MGYG000001850_01313	Ktr system potassium uptake protein A	TC	5903	6550	+	2.A.38.4.6
MGYG000001850_01314	hypothetical protein	TF	7127	7564	+	MarR
MGYG000001850_01315	putative ABC transporter ATP-binding protein	TC	7561	9288	+	3.A.1.135.7
MGYG000001850_01316	putative ABC transporter ATP-binding protein	TC	9281	11110	+	3.A.1.135.5
MGYG000001850_01317	HTH-type transcriptional activator RhaR	TF	11154	11999	-	HTH_AraC+HTH_AraC
MGYG000001850_01318	hypothetical protein	CAZyme	12100	14349	+	GH95\| CBM51
MGYG000001850_01319	L-fucose isomerase	null	14489	16273	+	Fucose_iso_N1\| Fucose_iso_N2\| Fucose_iso_C
MGYG000001850_01320	hypothetical protein	null	16317	18455	+	No domain
MGYG000001850_01321	hypothetical protein	CAZyme	18452	20269	+	GH140
Protein ID	Protein Name	Type	Start	End	Strand	Signature